Description

sequestosome 1 [Source:HGNC Symbol;Acc:HGNC:11280]

Synonyms

A170, OSIL, p60, p62, p62B, PDB3

Gene

This transcript is a product of gene ENSG00000161011

This gene has 15 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
SQSTM1-001ENST000003898052986 bp440 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS34317C9JRJ8 E9PFW8 Q13501
NM_003900
NP_003891
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SQSTM1-002ENST000003607182253 bp356 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS47355C9JRJ8 E9PFW8 Q13501
NM_001142298
NM_001142299
NP_001135770
NP_001135771
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SQSTM1-013ENST000005101871714 bp378 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9JRJ8 E7EMC7 E9PFW8
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SQSTM1-015ENST00000514093842 bp167 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9JRJ8 E9PFW8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SQSTM1-003ENST00000422245628 bp140 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9JRJ8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SQSTM1-017ENST00000504627602 bp190 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E3W990 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SQSTM1-016ENST00000508284578 bp69 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D6RBF1 -
SQSTM1-008ENST00000453046572 bp73 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-C9J6J8 D6RBF1 -
SQSTM1-010ENST000005066902405 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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SQSTM1-011ENST000005122341722 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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SQSTM1-014ENST00000506042921 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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SQSTM1-004ENST00000481335562 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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SQSTM1-005ENST00000464493532 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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SQSTM1-007ENST00000466342808 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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SQSTM1-006ENST00000485412656 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Statistics

Exons: 3 Coding exons: 0 Transcript length: 2,405 bps

Ensembl version

ENST00000506690.1

Type

Known processed transcript

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays