Description

sequestosome 1 [Source:HGNC Symbol;Acc:11280]

Gene

This transcript is a product of gene ENSG00000161011

This gene has 17 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
SQSTM1-001ENST000003898052986ENSP00000374455440Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS34317YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
SQSTM1-201ENST000003769292913ENSP00000366128356Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS47355YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
SQSTM1-002ENST000003607182253ENSP00000353944356Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS47355YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
SQSTM1-202ENST000004028742000ENSP00000385553356Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS47355YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
SQSTM1-013ENST000005101871714ENSP00000424477378Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
SQSTM1-015ENST00000514093842ENSP00000427308167Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
SQSTM1-003ENST00000422245628ENSP00000394534140Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
SQSTM1-017ENST00000504627602ENSP00000425957190Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
SQSTM1-016ENST00000508284578ENSP0000042419569Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
SQSTM1-008ENST00000453046572ENSP0000040506173Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
SQSTM1-010ENST000005066902405No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
SQSTM1-011ENST000005122341722No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
SQSTM1-014ENST00000506042921No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
SQSTM1-004ENST00000481335562No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
SQSTM1-005ENST00000464493532No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
SQSTM1-007ENST00000466342808No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
SQSTM1-006ENST00000485412656No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
Statistics

Exons: 7 Coding exons: 7 Transcript length: 1,714 bps Translation length: 378 residues

Ensembl version

ENST00000510187.1

Type

Putative protein coding

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTHUMT00000372426 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays