Description

cytochrome P450, family 11, subfamily B, polypeptide 1 [Source:HGNC Symbol;Acc:HGNC:2591]

Synonyms

CPN1, CYP11B, FHI, P450C11

About this transcript

This transcript has 9 exons, is annotated with 26 domains and features, is associated with 423 variations and maps to 46 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
CYP11B1-001ENST000002924272664503aaENSP00000292427
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS6392P15538 NM_000497
NP_000488
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

CYP11B1-002ENST000005174711874437aaENSP00000428043
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS34953P15538 NM_001026213
NP_001021384
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
CYP11B1-005ENST000005192852562181aaENSP00000430144
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0YBR4 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CYP11B1-003ENST000003776752280574aaENSP00000366903
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q4VAR0 -TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
CYP11B1-004ENST000003141113726No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 9 Coding exons: 9 Transcript length: 2,664 bps Translation length: 503 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS6392

Uniprot

This transcript corresponds to the following Uniprot identifiers: P15538

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000292427.7

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays