Description

ubiquitin protein ligase E3 component n-recognin 1 [Source:HGNC Symbol;Acc:HGNC:16808]

Synonyms

Location
Gene

This transcript is a product of gene ENSG00000159459

This gene has 11 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
UBR1-001ENST000002906507761 bp1749 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS10091Q8IWV7 NM_174916
NP_777576
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
UBR1-002ENST000005462743332 bp1070 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
UBR1-005ENST00000569243702 bp172 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
UBR1-003ENST000005690662250 bp148 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-Q8IWV7 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
UBR1-004ENST00000564540735 bp71 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
UBR1-010ENST00000569971721 bp72 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H3BQF8 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
UBR1-011ENST00000569337549 bp62 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H3BNQ6 -
UBR1-009ENST00000563239545 bp31 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H3BS20 -
UBR1-006ENST00000568782615 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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UBR1-007ENST00000566493598 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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UBR1-008ENST00000562173597 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Statistics

Exons: 47 Coding exons: 47 Transcript length: 7,761 bps Translation length: 1,749 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS10091

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8IWV7

Ensembl version

ENST00000290650.5

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays