Human (GRCh38.p14)
Description

aggrecan [Source:HGNC Symbol;Acc:HGNC:319]

Gene Synonyms

AGC1, CSPG1, CSPGCP, MSK16

Location
About this transcript

This transcript has 19 exons, is annotated with 103 domains and features, is associated with 35923 variant alleles and maps to 954 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000560601.4ACAN-20789602568aaENSP00000453581.2
 
Protein coding
CCDS92054H0YMF1 NM_001369268.1MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:3
ENST00000439576.7ACAN-20288422530aaENSP00000387356.2
 
Protein coding
CCDS53970P16112-1 -GENCODE basicTSL:5
ENST00000561243.7ACAN-20880752530aaENSP00000453342.3
 
Protein coding
CCDS92055A0A5K1VW97 -GENCODE basicTSL:5
ENST00000559004.5ACAN-20676282492aaENSP00000453499.1
 
Protein coding
CCDS92056P16112-2 -GENCODE basicTSL:5
ENST00000352105.11ACAN-20175262431aaENSP00000341615.7
 
Protein coding
CCDS53971P16112-3 -GENCODE basicTSL:5
ENST00000558207.5ACAN-2034159721aaENSP00000453003.1
 
Protein coding
Q6PID9 -GENCODE basicTSL:1
ENST00000558704.1ACAN-205712156aaENSP00000452682.1
 
Protein coding
H0YK70 -TSL:3CDS 5' incomplete
ENST00000558604.1ACAN-204749No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 19, Coding exons: 18, Transcript length: 8,960 bps, Translation length: 2,568 residues

MANE

This MANE Select transcript contains ENSP00000453581 and matches to NM_001369268.1 and NP_001356197.1

CCDS

This transcript is a member of the Human CCDS set: CCDS92054

Transcript Support Level (TSL)

TSL:3

Version

ENST00000560601.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

inferred transcript model [Definitions]

RNA-Seq supported partial

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.