Description

aggrecan [Source:HGNC Symbol;Acc:HGNC:319]

Synonyms

AGC1, CSPG1, CSPGCP, MSK16

Location
Gene

This transcript is a product of gene ENSG00000157766

This gene has 9 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
ACAN-201ENST000004395768840 bp2530 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS53970E7EX88 Q6LE94 NM_013227
NP_037359
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ACAN-006ENST000005612437593 bp2530 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS53970E7EX88 Q6LE94 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ACAN-004ENST000003521057526 bp2431 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS53971E7ENV9 NM_001135
NP_001126
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ACAN-202ENST000006173018669 bp2473 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ACAN-008ENST000005590047628 bp2492 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0YM81 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ACAN-001ENST000005582074159 bp721 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q6PID9 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ACAN-003ENST00000558704712 bp156 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
ACAN-005ENST00000560601679 bp226 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q6LE94 -CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
ACAN-002ENST00000558604749 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 16 Coding exons: 15 Transcript length: 7,526 bps Translation length: 2,431 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS53971

Ensembl version

ENST00000352105.8

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays