Description

aggrecan [Source:HGNC Symbol;Acc:HGNC:319]

Synonyms

AGC1, CSPG1, CSPGCP, MSK16

Location
About this transcript

This transcript has 17 exons, is annotated with 59 domains and features, is associated with 1414 variations and maps to 51 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
ACAN-201ENST0000043957688402530aaENSP00000387356
 
Protein coding
CCDS53970E7EX88 NM_013227
NP_037359
TSL:5GENCODE basicAPPRIS P1
ACAN-006ENST0000056124375932530aaENSP00000453342
 
Protein coding
CCDS53970E7EX88 -TSL:5GENCODE basicAPPRIS P1
ACAN-004ENST0000035210575262431aaENSP00000341615
 
Protein coding
CCDS53971E7ENV9 NM_001135
NP_001126
TSL:5GENCODE basic
ACAN-202ENST0000061730186692473aaENSP00000484456
 
Protein coding
-A0A087X1T7 -TSL:5GENCODE basic
ACAN-008ENST0000055900476282492aaENSP00000453499
 
Protein coding
-H0YM81 -TSL:5GENCODE basic
ACAN-001ENST000005582074159721aaENSP00000453003
 
Protein coding
-Q6PID9 -TSL:1GENCODE basic
ACAN-003ENST00000558704712156aaENSP00000452682
 
Protein coding
-H0YK70 -CDS 5' incompleteTSL:3
ACAN-005ENST00000560601679226aaENSP00000453581
 
Protein coding
-H0YMF1 -CDS 5' and 3' incompleteTSL:3
ACAN-002ENST00000558604749No protein-
 
Retained intron
---TSL:2
Statistics

Exons: 17 Coding exons: 16 Transcript length: 7,628 bps Translation length: 2,492 residues

Transcript Support Level (TSL)

TSL:5

Ensembl version

ENST00000559004.5

Type

Known protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays