Description

retinitis pigmentosa GTPase regulator [Source:HGNC Symbol;Acc:HGNC:10295]

Synonyms

COD1, CORDX1, CRD, RP15, RP3

Location
About this transcript

This transcript has 15 exons, is annotated with 35 domains and features, is associated with 1121 variations and maps to 34 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
RPGR-009ENST0000037850547671152aaENSP00000367766
 
Protein coding
CCDS35229Q92834 NM_001034853
NP_001030025
TSL:5GENCODE basicAPPRIS ALT2
RPGR-001ENST000003188423108815aaENSP00000322219
 
Protein coding
CCDS14246Q92834 NM_000328
NP_000319
TSL:1GENCODE basicAPPRIS P3
RPGR-201ENST0000033936336861020aaENSP00000343671
 
Protein coding
-Q92834 -TSL:5GENCODE basicAPPRIS ALT2
RPGR-006ENST00000464437428129aaENSP00000417574
 
Protein coding
-H7C4L1 -CDS 5' incompleteTSL:3
RPGR-004ENST00000494707426143aaENSP00000417336
 
Protein coding
-H7C4H4 -CDS 5' and 3' incompleteTSL:5
RPGR-002ENST000004828552819646aaENSP00000419276
 
Nonsense mediated decay
-Q92834 -TSL:2
RPGR-007ENST000004745842268480aaENSP00000418926
 
Nonsense mediated decay
-Q92834 -TSL:2
RPGR-003ENST000004765591047No protein-
 
Retained intron
---TSL:2
RPGR-008ENST00000494841653No protein-
 
Retained intron
---TSL:1
RPGR-005ENST00000470183382No protein-
 
Retained intron
---TSL:2
Statistics

Exons: 15 Coding exons: 15 Transcript length: 4,767 bps Translation length: 1,152 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS35229

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q92834

Transcript Support Level (TSL)

TSL:5

Ensembl version

ENST00000378505.6

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays