Description

retinitis pigmentosa GTPase regulator [Source:HGNC Symbol;Acc:HGNC:10295]

Synonyms

COD1, CORDX1, CRD, RP15, RP3

Location
Gene

This transcript is a product of gene ENSG00000156313

This gene has 10 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
RPGR-009ENST000003785054767 bp1152 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS35229Q92834 NM_001034853
NP_001030025
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
RPGR-001ENST000003188423108 bp815 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS14246Q92834 NM_000328
NP_000319
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
RPGR-201ENST000003393633686 bp1020 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q92834 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
RPGR-006ENST00000464437428 bp129 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
RPGR-004ENST00000494707426 bp143 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
RPGR-002ENST000004828552819 bp646 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-Q92834 -
RPGR-007ENST000004745842268 bp480 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-Q92834 -
RPGR-003ENST000004765591047 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
RPGR-008ENST00000494841653 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
RPGR-005ENST00000470183382 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 15 Coding exons: 15 Transcript length: 4,767 bps Translation length: 1,152 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS35229

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q92834

Ensembl version

ENST00000378505.3

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays