Description

leucine-rich repeat kinase 1 [Source:HGNC Symbol;Acc:18608]

Gene

This transcript is a product of gene ENSG00000154237

This gene has 12 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
LRRK1-003ENST000003889487671ENSP000003736002015Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS42086YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
LRRK1-201ENST000002843957701ENSP000002843952012Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
LRRK1-004ENST000005320291241ENSP00000433268264Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
LRRK1-007ENST00000534045569ENSP0000043514832Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
LRRK1-001ENST000005252846494ENSP00000433069689Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
LRRK1-002ENST000005312706015ENSP00000431668650Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
LRRK1-005ENST000005264573483ENSP00000436672660Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. 5'--
LRRK1-006ENST000005321452790No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
LRRK1-010ENST00000525395737No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
LRRK1-008ENST00000527698679No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
LRRK1-009ENST00000525617614No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
LRRK1-011ENST00000538064493No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
Statistics

Exons: 4 Coding exons: 0 Transcript length: 2,790 bps

Ensembl version

ENST00000532145.1

Type

Known processed transcript

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000384573 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays