Description

leucine-rich repeat kinase 1 [Source:HGNC Symbol;Acc:HGNC:18608]

Synonyms

FLJ23119, KIAA1790, RIPK6, Roco1

About this transcript

This transcript has 34 exons, is annotated with 62 domains and features, is associated with 1061 variations and maps to 69 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
LRRK1-003ENST0000038894876712015aaENSP00000373600
 
Protein coding
CCDS42086Q38SD2 NM_024652
NP_078928
TSL:5GENCODE basicAPPRIS P1
LRRK1-004ENST000005320291241264aaENSP00000433268
 
Protein coding
-Q38SD2 -TSL:1GENCODE basic
LRRK1-007ENST0000053404556932aaENSP00000435148
 
Protein coding
-E9PLF8 -CDS 3' incompleteTSL:3
LRRK1-005ENST0000052645711632660aaENSP00000436672
 
Nonsense mediated decay
-H0YEW1 -CDS 5' incompleteTSL:1
LRRK1-001ENST000005252846494689aaENSP00000433069
 
Nonsense mediated decay
-E9PMK9 -TSL:1
LRRK1-002ENST000005312706015650aaENSP00000431668
 
Nonsense mediated decay
-E9PK39 -TSL:1
LRRK1-006ENST000005321452790No protein-
 
Processed transcript
---TSL:2
LRRK1-010ENST00000525395737No protein-
 
Processed transcript
---TSL:5
LRRK1-008ENST00000527698679No protein-
 
Retained intron
---TSL:2
LRRK1-009ENST00000525617614No protein-
 
Retained intron
---TSL:5
LRRK1-011ENST00000538064493No protein-
 
Retained intron
---TSL:5
Statistics

Exons: 34 Coding exons: 33 Transcript length: 7,671 bps Translation length: 2,015 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS42086

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q38SD2

Transcript Support Level (TSL)

TSL:5

Ensembl version

ENST00000388948.7

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays