Description

SET binding protein 1 [Source:HGNC Symbol;Acc:HGNC:15573]

Synonyms

KIAA0437, SEB

Location
Gene

This transcript is a product of gene ENSG00000152217

This gene has 3 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
SETBP1-001ENST0000028203098991596 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11923K7ES17 Q9Y6X0 NM_015559
NP_056374
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
SETBP1-002ENST000004268381785242 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS45859K7ES17 Q9Y6X0 NM_001130110
NP_001123582
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SETBP1-003ENST00000591940762137 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-K7ES17 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 4 Coding exons: 3 Transcript length: 1,785 bps Translation length: 242 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS45859

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y6X0

Transcript Support Level

1

Ensembl version

ENST00000426838.6

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays