Human (GRCh38.p14)
Description

protein tyrosine phosphatase receptor type O [Source:HGNC Symbol;Acc:HGNC:9678]

Gene Synonyms

GLEPP1, NPHS6, PTP-OC, PTP-U2, PTPU2

Location
About this transcript

This transcript has 14 exons, is annotated with 19 domains and features, is associated with 21804 variant alleles and maps to 524 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000281171.9PTPRO-20161281216aaENSP00000281171.4
 
Protein coding
CCDS8675Q16827-1 NM_030667.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P4TSL:1
ENST00000674388.1PTPRO-2227814405aaENSP00000501494.1
 
Protein coding
CCDS44837Q16827-3 -GENCODE basic
ENST00000674316.1PTPRO-21864031216aaENSP00000501352.1
 
Protein coding
CCDS8675Q16827-1 -GENCODE basicAPPRIS P4
ENST00000348962.7PTPRO-20259991188aaENSP00000343434.2
 
Protein coding
CCDS8674Q16827-2 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000674188.1PTPRO-21446411068aaENSP00000501325.1
 
Protein coding
A0A6I8PL17 -GENCODE basic
ENST00000445537.6PTPRO-2044062405aaENSP00000393449.2
 
Protein coding
CCDS44837Q16827-3 -GENCODE basicTSL:2
ENST00000544244.5PTPRO-2103978377aaENSP00000439234.1
 
Protein coding
CCDS53754Q16827-4 -GENCODE basicTSL:2
ENST00000542557.5PTPRO-2082946377aaENSP00000437571.1
 
Protein coding
CCDS53754Q16827-4 -GENCODE basicTSL:1
ENST00000442921.7PTPRO-2032758405aaENSP00000404188.2
 
Protein coding
CCDS44837Q16827-3 -GENCODE basicTSL:1
ENST00000543886.6PTPRO-2092095597aaENSP00000444173.1
 
Protein coding
Q16827-5 -GENCODE basicTSL:1
ENST00000535322.1PTPRO-206472116aaENSP00000446201.1
 
Protein coding
H0YH60 -TSL:3CDS 5' incomplete
ENST00000674391.1PTPRO-2235964395aaENSP00000501451.1
 
Nonsense mediated decay
A0A6I8PRZ5 --
ENST00000674261.1PTPRO-21656501216aaENSP00000501538.1
 
Nonsense mediated decay
CCDS8675Q16827-1 --
ENST00000674286.1PTPRO-21756171051aaENSP00000501361.1
 
Nonsense mediated decay
A0A6I8PRB8 --
ENST00000544706.2PTPRO-2113544393aaENSP00000501413.1
 
Nonsense mediated decay
A0A6I8PRG8 -TSL:2
ENST00000674220.1PTPRO-2153039149aaENSP00000501384.1
 
Nonsense mediated decay
A0A6I8PU14 --
ENST00000674352.1PTPRO-2192845218aaENSP00000501378.1
 
Nonsense mediated decay
A0A6I8PIM6 -CDS 5' incomplete
ENST00000674385.1PTPRO-221121065aaENSP00000501540.1
 
Nonsense mediated decay
A0A6I8PS48 -CDS 5' incomplete
ENST00000535311.5PTPRO-20553388aaENSP00000445621.1
 
Nonsense mediated decay
H0YH11 -TSL:4CDS 5' incomplete
ENST00000674392.1PTPRO-2242796No protein-
 
Protein coding CDS not defined
---
ENST00000674354.1PTPRO-2202682No protein-
 
Protein coding CDS not defined
---
ENST00000674483.1PTPRO-226987No protein-
 
Protein coding CDS not defined
---
ENST00000545023.1PTPRO-212512No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000674434.1PTPRO-2253800No protein-
 
Retained intron
---
ENST00000674186.1PTPRO-2132861No protein-
 
Retained intron
---
ENST00000538907.1PTPRO-207580No protein-
 
Retained intron
--TSL:4
Statistics

Exons: 14, Coding exons: 12, Transcript length: 2,946 bps, Translation length: 377 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q16827

CCDS

This transcript is a member of the Human CCDS set: CCDS53754

Transcript Support Level (TSL)

TSL:1

Version

ENST00000542557.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.