Description

mohawk homeobox [Source:HGNC Symbol;Acc:HGNC:23729]

Synonyms

C10orf48, IRXL1, MGC39616

Location
About this transcript

This transcript has 7 exons, is annotated with 5 domains and features, is associated with 149 variations and maps to 27 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
MKX-001ENST000003757903846352aaENSP00000364946
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7156Q8IYA7 -TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

MKX-201ENST000004197613638352aaENSP00000400896
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7156Q8IYA7 NM_001242702
NM_173576
NP_001229631
NP_775847
TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

MKX-002ENST000004609191002290aaENSP00000452751
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0YKC7 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

MKX-003ENST0000056122743158aaENSP00000453746
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0YMU2 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 7 Coding exons: 6 Transcript length: 3,638 bps Translation length: 352 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS7156

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8IYA7

Transcript Support Level (TSL)

TSL:2

Ensembl version

ENST00000419761.4

Type

Known protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays