Description

junctophilin 2 [Source:HGNC Symbol;Acc:HGNC:14202]

Synonyms

JP-2

Location
About this transcript

This transcript has 6 exons, is annotated with 30 domains and features, is associated with 209 variations and maps to 19 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
JPH2-001ENST000003729804787696aaENSP00000362071
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS13325Q9BR39 NM_020433
NP_065166
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
JPH2-002ENST000003422721923129aaENSP00000344590
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS13326Q9BR39 NM_175913
NP_787109
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Statistics

Exons: 6 Coding exons: 5 Transcript length: 4,787 bps Translation length: 696 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS13325

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BR39

Transcript Support Level (TSL)

TSL:5

Ensembl version

ENST00000372980.3

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays