Human (GRCh38.p14)
Description

C9orf72-SMCR8 complex subunit [Source:HGNC Symbol;Acc:HGNC:28337]

Gene Synonyms

DENND9, DENNL72, MGC23980

Location
About this transcript

This transcript has 5 exons, is annotated with 3 domains and features, is associated with 6174 variant alleles and maps to 133 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000380003.8C9orf72-2033231481aaENSP00000369339.3
 
Protein coding
CCDS6522Q96LT7-1 NM_018325.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000619707.5C9orf72-2053338481aaENSP00000482753.1
 
Protein coding
CCDS6522Q96LT7-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000644136.1C9orf72-2062678492aaENSP00000494872.1
 
Protein coding
A0A2R8Y5K2 -GENCODE basic
ENST00000379997.7C9orf72-2021873222aaENSP00000369333.3
 
Protein coding
CCDS6523Q96LT7-2 -GENCODE basicTSL:2
ENST00000647196.1C9orf72-2071398373aaENSP00000494839.1
 
Protein coding
A0A2R8Y5U5 -GENCODE basic
ENST00000379995.1C9orf72-201777222aaENSP00000369331.1
 
Protein coding
CCDS6523Q96LT7-2 -GENCODE basicTSL:3
ENST00000673600.1C9orf72-2082318431aaENSP00000500650.1
 
Nonsense mediated decay
A0A5F9ZHW7 --
ENST00000488117.5C9orf72-2044808No protein-
 
Protein coding CDS not defined
--TSL:2
Statistics

Exons: 5, Coding exons: 4, Transcript length: 777 bps, Translation length: 222 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96LT7

CCDS

This transcript is a member of the Human CCDS set: CCDS6523

Transcript Support Level (TSL)

TSL:3

Version

ENST00000379995.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.