Description

ankyrin repeat and SOCS box containing 10 [Source:HGNC Symbol;Acc:HGNC:17185]

Synonyms

GLC1F

Gene

This transcript is a product of gene ENSG00000146926

This gene has 4 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
ASB10-002ENST000002758381820429 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS47749D5MNW9 Q8WXI3 NM_001142460
NP_001135932
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ASB10-003ENST000003778671738452 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS5921Q8WXI3 NM_080871
NP_543147
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ASB10-001ENST000004201751694467 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS47750J3KQJ5 Q8WXI3 NM_001142459
NP_001135931
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website
ASB10-004ENST00000415615779115 aa
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F8WB38 -TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 6 Coding exons: 5 Transcript length: 1,694 bps Translation length: 467 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS47750

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8WXI3

Transcript Support Level

1

Ensembl version

ENST00000420175.2

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays