Description

CDGSH iron sulfur domain 2 [Source:HGNC Symbol;Acc:HGNC:24212]

Synonyms

ERIS, Miner1, NAF-1, WFS2, ZCD2

About this transcript

This transcript has 4 exons, is annotated with 1 domain and feature, is associated with 6 variations and maps to 4 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
CISD2-001ENST000002739862327135aaENSP00000273986
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS34040Q8N5K1 NM_001008388
NP_001008389
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
CISD2-002ENST00000503643808145aaENSP00000423716
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RCF4 -TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
CISD2-005ENST0000057444647147aaENSP00000458976
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-I3L1N9 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 4 Coding exons: 2 Transcript length: 471 bps Translation length: 47 residues

Transcript Support Level (TSL)

TSL:5

Ensembl version

ENST00000574446.1

Type

Known nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays