Description

EPH receptor A5 [Source:HGNC Symbol;Acc:HGNC:3389]

Synonyms

CEK7, EHK1, Hek7, TYRO4

Location
About this transcript

This transcript has 18 exons, is annotated with 36 domains and features, is associated with 501 variations and maps to 21 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
EPHA5-202ENST0000062215084211038aaENSP00000480763
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS75133B7ZKJ3 NM_001281765
NP_001268694
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI4APPRIS candidate principal isoform (longest CCDS)
Glossary entry for APPRIS
APPRIS website
EPHA5-201ENST0000061374083551016aaENSP00000478537
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS75131B7ZKW7 NM_001281766
NP_001268695
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
EPHA5-001ENST0000027385482661037aaENSP00000273854
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS3513P54756 NM_004439
NP_004430
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
EPHA5-004ENST0000051129451761004aaENSP00000427638
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS75132F8VP57 NM_001281767
NP_001268696
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
EPHA5-002ENST0000035483934271015aaENSP00000346899
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS3514P54756 NM_182472
NP_872272
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
EPHA5-003ENST000004326383662874aaENSP00000389208
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F8W9W0 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Statistics

Exons: 18 Coding exons: 18 Transcript length: 8,266 bps Translation length: 1,037 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS3513

Uniprot

This transcript corresponds to the following Uniprot identifiers: P54756

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000273854.6

Type

Known protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays