Human (GRCh38.p14)
Description

SRY-box transcription factor 13 [Source:HGNC Symbol;Acc:HGNC:11192]

Gene Synonyms

ICA12, MGC117216, SOX-13

About this transcript

This transcript has 6 exons, is associated with 2837 variant alleles and maps to 166 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000367204.6SOX13-2034076622aaENSP00000356172.1
 
Protein coding
CCDS44299Q9UN79 NM_005686.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000618875.4SOX13-2103476622aaENSP00000478239.1
 
Protein coding
CCDS44299Q9UN79 -GENCODE basicAPPRIS P1TSL:1
ENST00000528591.5SOX13-207597179aaENSP00000436297.1
 
Protein coding
E9PPW0 -TSL:4CDS 3' incomplete
ENST00000525442.1SOX13-20653857aaENSP00000433595.1
 
Protein coding
E9PKD6 -TSL:4CDS 3' incomplete
ENST00000480326.1SOX13-204699128aaENSP00000434093.1
 
Nonsense mediated decay
H0YDQ5 -TSL:5CDS 5' incomplete
ENST00000367203.8SOX13-2023525No protein-
 
Protein coding CDS not defined
--TSL:1
ENST00000272193.10SOX13-2011754No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000530882.1SOX13-208769No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000534185.1SOX13-209723No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000525258.1SOX13-205744No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 6, Coding exons: 4, Transcript length: 699 bps, Translation length: 128 residues

Transcript Support Level (TSL)

TSL:5

Incomplete CDS

CDS 5' incomplete

Version

ENST00000480326.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.