Human (GRCh38.p14)
Description

lysosomal trafficking regulator [Source:HGNC Symbol;Acc:HGNC:1968]

Gene Synonyms

CHS, CHS1, MAUVE

About this transcript

This transcript has 53 exons, is annotated with 39 domains and features, is associated with 82434 variant alleles and maps to 1591 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000389793.7LYST-201134663801aaENSP00000374443.2
 
Protein coding
CCDS31062Q99698-1 NM_000081.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:5
ENST00000697182.1LYST-216471377aaENSP00000513169.1
 
Protein coding
A0A8V8TKS8 -GENCODE basic
ENST00000697241.1LYST-22742241408aaENSP00000513206.1
 
Protein coding
A0A8V8TM69 -CDS 5' and 3' incomplete
ENST00000697242.1LYST-22839381266aaENSP00000513207.1
 
Protein coding
A0A8V8TL83 -CDS 3' incomplete
ENST00000697235.1LYST-2213809651aaENSP00000513202.1
 
Protein coding
A0A8V8TL78 -CDS 5' incomplete
ENST00000697181.1LYST-215351664aaENSP00000513168.1
 
Protein coding
A0A8V8TL58 -GENCODE basic
ENST00000697183.1LYST-217304573aaENSP00000513170.1
 
Protein coding
A0A8V8TMC0 -GENCODE basic
ENST00000475277.2LYST-2082525629aaENSP00000513164.1
 
Protein coding
A0A8V8TM32 -TSL:5CDS 5' incomplete
ENST00000697184.1LYST-218216064aaENSP00000513171.1
 
Protein coding
A0A8V8TL58 -GENCODE basic
ENST00000468626.2LYST-206114077aaENSP00000513173.1
 
Protein coding
A0A8V8TKS8 -GENCODE basicTSL:1
ENST00000468107.5LYST-20595173aaENSP00000513172.1
 
Protein coding
A0A8V8TMC0 -GENCODE basicTSL:1
ENST00000487530.2LYST-209542181aaENSP00000417168.1
 
Protein coding
H7C4F5 -TSL:4CDS 5' and 3' incomplete
ENST00000697178.1LYST-212139201382aaENSP00000513163.1
 
Nonsense mediated decay
A0A8V8TKT6 --
ENST00000489585.5LYST-21070692001aaENSP00000513166.1
 
Nonsense mediated decay
Q99698-2 -TSL:1
ENST00000697236.1LYST-22267231011aaENSP00000513203.1
 
Nonsense mediated decay
A0A8V8TME5 -CDS 5' incomplete
ENST00000461526.2LYST-20257711013aaENSP00000513165.1
 
Nonsense mediated decay
A0A8V8TL52 -TSL:3CDS 5' incomplete
ENST00000697237.1LYST-2233918251aaENSP00000513204.1
 
Nonsense mediated decay
A0A8V8TKU7 -CDS 5' incomplete
ENST00000697240.1LYST-22637841076aaENSP00000513205.1
 
Nonsense mediated decay
A0A8V8TKW4 -CDS 5' incomplete
ENST00000697180.1LYST-214934208aaENSP00000513167.1
 
Nonsense mediated decay
A0A8V8TMB4 -CDS 5' incomplete
ENST00000697239.1LYST-2251275No protein-
 
Protein coding CDS not defined
---
ENST00000697186.1LYST-2201210No protein-
 
Protein coding CDS not defined
---
ENST00000697185.1LYST-2191169No protein-
 
Protein coding CDS not defined
---
ENST00000697248.1LYST-2291131No protein-
 
Protein coding CDS not defined
---
ENST00000697238.1LYST-2241035No protein-
 
Protein coding CDS not defined
---
ENST00000697249.1LYST-230668No protein-
 
Protein coding CDS not defined
---
ENST00000473037.5LYST-2078293No protein-
 
Retained intron
--TSL:2
ENST00000465349.5LYST-2045220No protein-
 
Retained intron
--TSL:1
ENST00000462376.2LYST-2035087No protein-
 
Retained intron
--TSL:4
ENST00000697179.1LYST-2134519No protein-
 
Retained intron
---
ENST00000492844.1LYST-211452No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 53, Coding exons: 51, Transcript length: 13,466 bps, Translation length: 3,801 residues

MANE

This MANE Select transcript contains ENSP00000374443 and matches to NM_000081.4 and NP_000072.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99698

CCDS

This transcript is a member of the Human CCDS set: CCDS31062

Transcript Support Level (TSL)

TSL:5

Version

ENST00000389793.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.