Description

transmembrane protein 50B [Source:HGNC Symbol;Acc:1280]

Location
Gene

This transcript is a product of gene ENSG00000142188

This gene has 10 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
TMEM50B-001ENST000005422302375ENSP00000439768158Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS13625YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
TMEM50B-005ENST00000432504619ENSP0000038762281Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
TMEM50B-002ENST000004204553062ENSP00000397773158Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. -CCDS13625-
TMEM50B-004ENST00000442441982ENSP00000409942151Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
TMEM50B-011ENST00000441128634ENSP0000039885944Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
TMEM50B-008ENST00000468874724No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
TMEM50B-009ENST00000484377695No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
TMEM50B-007ENST00000470682364No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
TMEM50B-003ENST00000459909618No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
TMEM50B-006ENST00000474272518No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
Statistics

Exons: 8 Coding exons: 5 Transcript length: 982 bps Translation length: 151 residues

Ensembl version

ENST00000442441.1

Type

Known nonsense mediated decay

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTHUMT00000140082 (version 4)

Transcript-based displays