Description

GATA binding protein 6 [Source:HGNC Symbol;Acc:HGNC:4174]

Location
Gene

This transcript is a product of gene ENSG00000141448

This gene has 2 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
GATA6-001ENST000002692163770595 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11872Q05CA6 Q92908 NM_005257
NP_005248
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website
GATA6-002ENST000005816942057595 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11872Q05CA6 Q92908 -TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website
Statistics

Exons: 6 Coding exons: 6 Transcript length: 2,057 bps Translation length: 595 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS11872

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q92908

Transcript Support Level

1

Ensembl version

ENST00000581694.1

Type

Known protein coding

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays