Description

GATA binding protein 6 [Source:HGNC Symbol;Acc:HGNC:4174]

Location
About this transcript

This transcript has 7 exons, is annotated with 22 domains and features, is associated with 107 variations and maps to 12 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
GATA6-001ENST000002692163770595aaENSP00000269216
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11872Q92908 NM_005257
NP_005248
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
GATA6-002ENST000005816942057595aaENSP00000462313
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11872Q92908 -TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Statistics

Exons: 7 Coding exons: 6 Transcript length: 3,770 bps Translation length: 595 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS11872

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q92908

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000269216.6

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays