Description

tropomyosin 1 (alpha) [Source:HGNC Symbol;Acc:HGNC:12010]

Synonyms

C15orf13, CMH3

Location
Gene

This transcript is a product of gene ENSG00000140416

This gene has 33 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
TPM1-018ENST000003582781717 bp284 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS32263D9YZV5 H0YL42 P09493
NM_001018006
NP_001018006
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TPM1-005ENST000002679961670 bp284 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS32262P09493 NM_001018007
NP_001018007
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TPM1-010ENST000005593971655 bp284 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58368H0YL42 P09493 NM_001018020
NP_001018020
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TPM1-011ENST000003348951637 bp245 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS32264D9YZV7 P09493 Q07413
NM_001018008
NP_001018008
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TPM1-001ENST000002883981295 bp284 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS10181H0YL42 P09493 NM_000366
NP_000357
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TPM1-002ENST000004039941049 bp284 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS45273D9YZV4 P09493 NM_001018005
NP_001018005
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TPM1-028ENST00000559556977 bp284 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58369P09493 NM_001018004
NP_001018004
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TPM1-034ENST000006107333957 bp106 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TPM1-008ENST000003579801800 bp326 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q6ZN40 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TPM1-012ENST000004044841568 bp248 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0YL42 H7BYY1 Q07413
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TPM1-003ENST000005609701039 bp265 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
TPM1-014ENST00000560959925 bp275 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B7Z596 H0YL42 Q07413
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TPM1-015ENST00000559281851 bp248 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0YK48 Q07413 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TPM1-023ENST00000558910782 bp33 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
TPM1-016ENST00000317516738 bp245 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5H7S3 H0YL42 Q07413
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TPM1-027ENST00000561266671 bp223 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
TPM1-022ENST00000560615570 bp108 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0YL42 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
TPM1-019ENST00000560445485 bp70 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0YKZ6 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TPM1-024ENST00000560679292 bp8 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
TPM1-017ENST000005582642687 bp92 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H0YK20 -
TPM1-009ENST000005583471525 bp157 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H0YKP3 -
TPM1-013ENST000005585441399 bp49 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H0YN06 Q07413 -
TPM1-033ENST00000561395673 bp68 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H0YL80 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
TPM1-020ENST00000561425582 bp40 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H0YLS7 -
TPM1-029ENST00000559831573 bp142 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H0YK20 H0YKX5 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
TPM1-007ENST000005609752855 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
TPM1-006ENST000005583141031 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
TPM1-032ENST00000561242673 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
TPM1-030ENST00000558400658 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
TPM1-021ENST00000558868653 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
TPM1-026ENST00000560131537 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
TPM1-025ENST00000558072525 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
TPM1-031ENST00000559108437 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 8 Coding exons: 8 Transcript length: 1,637 bps Translation length: 245 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS32264

Uniprot

This transcript corresponds to the following Uniprot identifiers: P09493

Ensembl version

ENST00000334895.6

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays