Description

tropomyosin 1 (alpha) [Source:HGNC Symbol;Acc:HGNC:12010]

Synonyms

C15orf13, CMH3

Location
About this transcript

This transcript has 9 exons, is annotated with 17 domains and features, is associated with 252 variations and maps to 35 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
TPM1-018ENST000003582781717284aaENSP00000351022
 
Protein coding
CCDS32263D9YZV5 P09493 NM_001018006
NP_001018006
TSL:1GENCODE basicAPPRIS ALT1
TPM1-005ENST000002679961670284aaENSP00000267996
 
Protein coding
CCDS32262A0A024R5W6 P09493 NM_001018007
NP_001018007
NP_001288173
TSL:1GENCODE basic
TPM1-010ENST000005593971655284aaENSP00000452879
 
Protein coding
CCDS58368P09493 NM_001018020
NP_001018020
TSL:2GENCODE basic
TPM1-011ENST000003348951637245aaENSP00000334624
 
Protein coding
CCDS32264D9YZV7 P09493 NM_001018008
NP_001018008
TSL:1GENCODE basic
TPM1-001ENST000002883981295284aaENSP00000288398
 
Protein coding
CCDS10181P09493 NM_000366
NP_000357
TSL:1GENCODE basicAPPRIS P3
TPM1-002ENST000004039941049284aaENSP00000385107
 
Protein coding
CCDS45273D9YZV4 P09493 NM_001018005
NP_001018005
TSL:1GENCODE basicAPPRIS ALT1
TPM1-028ENST00000559556977284aaENSP00000453941
 
Protein coding
CCDS58369P09493 NM_001018004
NP_001018004
TSL:2GENCODE basicAPPRIS ALT1
TPM1-034ENST000006107333957106aaENSP00000477929
 
Protein coding
-A0A087WTJ7 -TSL:2GENCODE basic
TPM1-008ENST000003579801800326aaENSP00000350667
 
Protein coding
-Q6ZN40 -TSL:2GENCODE basic
TPM1-012ENST000004044841568248aaENSP00000384315
 
Protein coding
-H7BYY1 NM_001301289
NP_001288218
TSL:1GENCODE basic
TPM1-023ENST00000558910123233aaENSP00000452830
 
Protein coding
-H0YKJ4 -CDS 5' incompleteTSL:2
TPM1-003ENST000005609701039265aaENSP00000453062
 
Protein coding
-H0YL52 -CDS 5' incompleteTSL:1
TPM1-014ENST00000560959925275aaENSP00000453724
 
Protein coding
-B7Z596 -TSL:2GENCODE basic
TPM1-015ENST00000559281851248aaENSP00000452658
 
Protein coding
-H0YK48 -TSL:5GENCODE basic
TPM1-016ENST00000317516738245aaENSP00000322577
 
Protein coding
-F5H7S3 -TSL:1GENCODE basic
TPM1-027ENST00000561266671223aaENSP00000453955
 
Protein coding
-H0YNC7 -CDS 5' incompleteTSL:3
TPM1-022ENST00000560615570108aaENSP00000453050
 
Protein coding
-H0YL42 -CDS 3' incompleteTSL:3
TPM1-019ENST0000056044548570aaENSP00000452999
 
Protein coding
-H0YKZ6 -TSL:3GENCODE basic
TPM1-024ENST000005606792928aaENSP00000453136
 
Protein coding
---CDS 3' incompleteTSL:3
TPM1-017ENST00000558264268792aaENSP00000452624
 
Nonsense mediated decay
-H0YK20 -TSL:2
TPM1-009ENST000005583471525157aaENSP00000452887
 
Nonsense mediated decay
-H0YKP3 -TSL:5
TPM1-013ENST00000558544139949aaENSP00000453817
 
Nonsense mediated decay
-H0YN06 -TSL:5
TPM1-033ENST0000056139567368aaENSP00000453092
 
Nonsense mediated decay
-H0YL80 -CDS 5' incompleteTSL:5
TPM1-020ENST0000056142558240aaENSP00000453324
 
Nonsense mediated decay
-H0YLS7 -TSL:5
TPM1-029ENST00000559831573142aaENSP00000452977
 
Nonsense mediated decay
-H0YKX5 -CDS 5' incompleteTSL:5
TPM1-007ENST000005609752855No protein-
 
Retained intron
---TSL:5
TPM1-006ENST000005583141031No protein-
 
Retained intron
---TSL:1
TPM1-032ENST00000561242673No protein-
 
Retained intron
---TSL:2
TPM1-030ENST00000558400658No protein-
 
Retained intron
---TSL:2
TPM1-021ENST00000558868653No protein-
 
Retained intron
---TSL:2
TPM1-026ENST00000560131537No protein-
 
Retained intron
---TSL:2
TPM1-025ENST00000558072525No protein-
 
Retained intron
---TSL:2
TPM1-031ENST00000559108437No protein-
 
Retained intron
---TSL:2
Statistics

Exons: 9 Coding exons: 9 Transcript length: 1,717 bps Translation length: 284 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS32263

Uniprot

This transcript corresponds to the following Uniprot identifiers: P09493

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000358278.7

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays