Description

prickle homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:HGNC:17019]

Synonyms

EPM1B, FLJ31937

Location
Gene

This transcript is a product of gene ENSG00000139174

This gene has 9 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
PRICKLE1-001ENST000003451275811 bp831 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8742F8VUG8 F8W1J1 F8W1Q8
Q687H3 Q687H4 Q96MT3
NM_153026
NP_694571
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PRICKLE1-201ENST000004556974253 bp831 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8742F8VUG8 F8W1J1 F8W1Q8
Q687H3 Q687H4 Q96MT3
NM_001144882
NM_001144883
NP_001138354
NP_001138355
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PRICKLE1-005ENST000004457664080 bp831 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8742F8VUG8 F8W1J1 F8W1Q8
Q687H3 Q687H4 Q96MT3
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PRICKLE1-003ENST000005486963584 bp831 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8742F8VUG8 F8W1J1 F8W1Q8
Q687H3 Q687H4 Q96MT3
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PRICKLE1-004ENST000005522403324 bp831 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8742F8VUG8 F8W1J1 F8W1Q8
Q687H3 Q687H4 Q96MT3
NM_001144881
NP_001138353
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PRICKLE1-007ENST00000551050693 bp119 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F8W1J1 F8W1Q8 Q687H3
Q687H4
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PRICKLE1-006ENST00000552108585 bp159 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F8VUG8 F8W1J1 F8W1Q8
Q687H3 Q687H4
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PRICKLE1-002ENST00000547113456 bp110 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F8W1Q8 Q687H3 Q687H4
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PRICKLE1-008ENST00000552200453 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Statistics

Exons: 8 Coding exons: 7 Transcript length: 5,811 bps Translation length: 831 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS8742

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96MT3

Ensembl version

ENST00000345127.4

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays