Description

PR domain containing 5 [Source:HGNC Symbol;Acc:9349]

Gene

This transcript is a product of gene ENSG00000138738

This gene has 12 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
PRDM5-001ENST000002648085330ENSP00000264808630Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS3716YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PRDM5-002ENST000003944352492ENSP00000377955111Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PRDM5-006ENST000004282092338ENSP00000404832599Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PRDM5-005ENST000005151092259ENSP00000422309501Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PRDM5-009ENST000005024091044ENSP00000424861145Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. 5'--
PRDM5-011ENST00000506065696No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PRDM5-007ENST00000505033576No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
PRDM5-012ENST00000513741210No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
PRDM5-004ENST000005054842396No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
PRDM5-003ENST000005128451249No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
PRDM5-010ENST00000503661847No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
PRDM5-008ENST00000507611535No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
Statistics

Exons: 4 Coding exons: 4 Transcript length: 2,492 bps Translation length: 111 residues

Ensembl version

ENST00000394435.2

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000363927 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays