Description

bone morphogenetic protein receptor, type IB [Source:HGNC Symbol;Acc:HGNC:1077]

Synonyms

ALK6, CDw293

Location
Gene

This transcript is a product of gene ENSG00000138696

This gene has 8 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
BMPR1B-001ENST000005150595567502 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS3642D6RGW8 O00238 NM_001203
NP_001194
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
BMPR1B-201ENST000004408905388532 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58919D6RGW8 O00238 NM_001256793
NP_001243722
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BMPR1B-002ENST000003949311922502 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS3642D6RGW8 O00238 -TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
BMPR1B-003ENST000002645681807502 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS3642D6RGW8 O00238 NM_001256794
NP_001243723
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
BMPR1B-007ENST000005095401764502 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS3642D6RGW8 O00238 -TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
BMPR1B-005ENST000005123121679502 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS3642D6RGW8 O00238 NM_001256792
NP_001243721
CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
BMPR1B-004ENST00000506363731125 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RGW8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

BMPR1B-006ENST00000502683567114 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RAW8 -TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Statistics

Exons: 11 Coding exons: 10 Transcript length: 1,679 bps Translation length: 502 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS3642

Uniprot

This transcript corresponds to the following Uniprot identifiers: O00238

Transcript Support Level

1

Ensembl version

ENST00000512312.3

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays