Description

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Source:HGNC Symbol;Acc:11102]

Gene

This transcript is a product of gene ENSG00000138375

This gene has 13 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
SMARCAL1-001ENST000003572763271ENSP00000349823954Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS2403YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
SMARCAL1-003ENST000003582073056ENSP00000350940954Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS2403YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
SMARCAL1-002ENST000003921282431ENSP00000375974796Protein codingGenes and/or transcript that contains an open reading frame (ORF).5'--
SMARCAL1-010ENST00000427645977ENSP00000392997326Protein codingGenes and/or transcript that contains an open reading frame (ORF).5' and 3'--
SMARCAL1-004ENST00000430374722ENSP00000405077146Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
SMARCAL1-006ENST00000444508711ENSP00000398969130Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
SMARCAL1-007ENST00000434435544ENSP0000040296792Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
SMARCAL1-009ENST00000412913538ENSP00000390248141Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
SMARCAL1-012ENST00000445153484ENSP00000400473162Protein codingGenes and/or transcript that contains an open reading frame (ORF).5' and 3'--
SMARCAL1-005ENST00000425815310ENSP0000039441019Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
SMARCAL1-011ENST00000479008633No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
SMARCAL1-013ENST00000486983793No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
SMARCAL1-008ENST00000496037542No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
Statistics

Exons: 18 Coding exons: 16 Transcript length: 3,056 bps Translation length: 954 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS2403

Ensembl version

ENST00000358207.5

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000337333 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays