Description

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Source:HGNC Symbol;Acc:HGNC:11102]

Synonyms

HARP, HHARP

About this transcript

This transcript has 2 exons and maps to 3 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
SMARCAL1-001ENST000003572763271954aaENSP00000349823
 
Protein coding
CCDS2403Q9NZC9 NM_014140
NP_054859
TSL:2GENCODE basicAPPRIS P1
SMARCAL1-003ENST000003582073056954aaENSP00000350940
 
Protein coding
CCDS2403Q9NZC9 NM_001127207
NP_001120679
TSL:1GENCODE basicAPPRIS P1
SMARCAL1-002ENST000003921282431796aaENSP00000375974
 
Protein coding
-H7BYI2 -CDS 5' incompleteTSL:1
SMARCAL1-010ENST00000427645977326aaENSP00000392997
 
Protein coding
-H7C051 -CDS 5' and 3' incompleteTSL:3
SMARCAL1-004ENST00000430374722146aaENSP00000405077
 
Protein coding
-C9J6I8 -CDS 3' incompleteTSL:2
SMARCAL1-006ENST00000444508711130aaENSP00000398969
 
Protein coding
-C9J8F8 -CDS 3' incompleteTSL:2
SMARCAL1-007ENST0000043443554492aaENSP00000402967
 
Protein coding
-C9JP32 -CDS 3' incompleteTSL:4
SMARCAL1-009ENST00000412913538141aaENSP00000390248
 
Protein coding
-C9JHQ1 -CDS 3' incompleteTSL:4
SMARCAL1-012ENST00000445153484162aaENSP00000400473
 
Protein coding
-H7C1I3 -CDS 5' and 3' incompleteTSL:5
SMARCAL1-005ENST0000042581531019aaENSP00000394410
 
Protein coding
-C9JS37 -CDS 3' incompleteTSL:3
SMARCAL1-011ENST00000479008633No protein-
 
Processed transcript
---TSL:3
SMARCAL1-013ENST00000486983793No protein-
 
Retained intron
---TSL:2
SMARCAL1-008ENST00000496037542No protein-
 
Retained intron
---TSL:4
Statistics

Exons: 2 Coding exons: 0 Transcript length: 793 bps

Transcript Support Level (TSL)

TSL:2

Ensembl version

ENST00000486983.1

Type

Known retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays