Description

discoidin domain receptor tyrosine kinase 1 [Source:HGNC Symbol;Acc:HGNC:2730]

Synonyms

CAK, CD167, EDDR1, NEP, NTRK4, PTK3A, RTK6

NameTranscript IDbpProteinBiotypeCCDSUniProtFlags
DDR1-005ENST000003833773971913 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A024RCL1 A2ABL0 A2ABL2
D6R9C4 D6RB35 D6RB82
D6RBU7 D6RGW5 E7EN94
E7ENJ2 E7EPH4 E7EPN2
E7EQ23 E7EQ30 E7ERI6
E7ERN0 E7ES06 E7ESR9
E7ETI3 E7ETX3 E7EUD5
E7EVT1 E7EVW6 E7EX99
E7EXB0 Q08345
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
DDR1-002ENST000004004143968913 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A024RCL1 A2ABL0 A2ABL2
D6R9C4 D6RB35 D6RB82
D6RBU7 D6RGW5 E7EN94
E7ENJ2 E7EPH4 E7EPN2
E7EQ23 E7EQ30 E7ERI6
E7ERN0 E7ES06 E7ESR9
E7ETI3 E7ETX3 E7EUD5
E7EVT1 E7EVW6 E7EX99
E7EXB0 Q08345
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
DDR1-202ENST000005530153857913 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A024RCL1 A2ABL0 A2ABL2
D6R9C4 D6RB35 D6RB82
D6RBU7 D6RGW5 E7EN94
E7ENJ2 E7EPH4 E7EPN2
E7EQ23 E7EQ30 E7ERI6
E7ERN0 E7ES06 E7ESR9
E7ETI3 E7ETX3 E7EUD5
E7EVT1 E7EVW6 E7EX99
E7EXB0 Q08345
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
DDR1-001ENST000002598753845876 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A024RCQ1 A2ABL0 A2ABL2
D6R9C4 D6RB35 D6RB82
D6RBU7 D6RGW5 E7EN94
E7ENJ2 E7EPH4 E7EPN2
E7EQ23 E7EQ30 E7ERI6
E7ERN0 E7ES06 E7ESR9
E7ETI3 E7ETX3 E7EUD5
E7EVT1 E7EVW6 E7EX99
E7EXB0 Q08345
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
DDR1-006ENST000004004103832876 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A024RCQ1 A2ABL0 A2ABL2
D6R9C4 D6RB35 D6RB82
D6RBU7 D6RGW5 E7EN94
E7ENJ2 E7EPH4 E7EPN2
E7EQ23 E7EQ30 E7ERI6
E7ERN0 E7ES06 E7ESR9
E7ETI3 E7ETX3 E7EUD5
E7EVT1 E7EVW6 E7EX99
E7EXB0 Q08345
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
DDR1-201ENST000005527213781894 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A024RCQ1 A2ABL0 A2ABL2
D6R9C4 D6RB35 D6RB82
D6RBU7 D6RGW5 E7EN94
E7ENJ2 E7EPH4 E7EPN2
E7EQ23 E7EQ30 E7ERI6
E7ERN0 E7ES06 E7ESR9
E7ETI3 E7ETX3 E7EUD5
E7EVT1 E7EVW6 E7EX99
E7EXB0 Q08345
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
DDR1-003ENST000004004113678876 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A024RCQ1 A2ABL0 A2ABL2
D6R9C4 D6RB35 D6RB82
D6RBU7 D6RGW5 E7EN94
E7ENJ2 E7EPH4 E7EPN2
E7EQ23 E7EQ30 E7ERI6
E7ERN0 E7ES06 E7ESR9
E7ETI3 E7ETX3 E7EUD5
E7EVT1 E7EVW6 E7EX99
E7EXB0 Q08345
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
DDR1-203ENST000006164043202767 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2ABL0 A2ABL2 D6R9C4
D6RB35 D6RB82 D6RBU7
D6RGW5 E7EN94 E7ENJ2
E7EPH4 E7EPN2 E7EQ23
E7EQ30 E7ERI6 E7ERN0
E7ES06 E7ESR9 E7ETI3
E7ETX3 E7EUD5 E7EVT1
E7EVW6 E7EX99 E7EXB0
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
DDR1-018ENST000004164871996378 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

DDR1-007ENST000004441981479493 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

DDR1-014ENST00000416705873139 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6R9C4 D6RB35 D6RB82
D6RBU7 E7EN94 E7ENJ2
E7EQ23 E7ERN0 E7ES06
E7ETX3 E7EUD5 E7EVT1
E7EVW6 E7EX99 E7EXB0
CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

DDR1-016ENST00000419285799209 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2ABL0 A2ABL2 D6R9C4
D6RB35 D6RB82 D6RBU7
E7EN94 E7ENJ2 E7EPN2
E7EQ23 E7ERI6 E7ERN0
E7ES06 E7ESR9 E7ETI3
E7ETX3 E7EUD5 E7EVT1
E7EVW6 E7EX99 E7EXB0
CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

DDR1-204ENST00000620318732243 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2ABL0 D6R9C4 D6RB35
D6RB82 D6RBU7 E7EN94
E7ENJ2 E7EPN2 E7EQ23
E7ERI6 E7ERN0 E7ES06
E7ESR9 E7ETI3 E7ETX3
E7EUD5 E7EVT1 E7EVW6
E7EX99 E7EXB0
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
DDR1-012ENST00000438728580166 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2ABL0 D6R9C4 D6RB35
D6RB82 D6RBU7 E7EN94
E7ENJ2 E7EQ23 E7ERI6
E7ERN0 E7ES06 E7ESR9
E7ETI3 E7ETX3 E7EUD5
E7EVT1 E7EVW6 E7EX99
E7EXB0
CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

DDR1-013ENST00000400407560147 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2ABL0 D6R9C4 D6RB35
D6RB82 D6RBU7 E7EN94
E7ENJ2 E7EQ23 E7ERN0
E7ES06 E7ESR9 E7ETX3
E7EUD5 E7EVT1 E7EVW6
E7EX99 E7EXB0
CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

DDR1-015ENST0000043133448563 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6R9C4 D6RB35 D6RB82
D6RBU7
CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

DDR1-004ENST000004682253588No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

DDR1-010ENST000004910121052No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

DDR1-008ENST00000481378268No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

DDR1-011ENST00000475380246No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

DDR1-009ENST000004855521038No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

DDR1-017ENST00000469592515No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 17 Coding exons: 16 Transcript length: 3,678 bps Translation length: 876 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q08345

Transcript Support Level

1

Ensembl version

ENST00000400411.3

Type

Known protein coding

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays