Human (GRCh38.p14)
Description

nucleoporin 42 [Source:HGNC Symbol;Acc:HGNC:17010]

Gene Synonyms

CG1, HCG1, H_RG271G13.9, NLP_1, NUPL2

Location
About this transcript

This transcript has 6 exons, is annotated with 1 domain and feature, is associated with 9040 variant alleles and maps to 291 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000258742.10NUP42-2011571423aaENSP00000258742.5
 
Protein coding
CCDS5379O15504-1 NM_007342.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000413919.1NUP42-2031329435aaENSP00000401475.1
 
Protein coding
C9JYA1 -TSL:3CDS 3' incomplete
ENST00000410002.7NUP42-202680155aaENSP00000387330.3
 
Protein coding
B4DT96 -GENCODE basicTSL:2
ENST00000438012.5NUP42-2051653224aaENSP00000415511.1
 
Nonsense mediated decay
O15504-2 -TSL:2
ENST00000437140.5NUP42-204128544aaENSP00000406677.1
 
Nonsense mediated decay
F8WC66 -TSL:5
ENST00000487595.5NUP42-209623No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000477844.1NUP42-2062529No protein-
 
Retained intron
--TSL:1
ENST00000485250.5NUP42-2072010No protein-
 
Retained intron
--TSL:5
ENST00000489145.1NUP42-210776No protein-
 
Retained intron
--TSL:2
ENST00000497500.5NUP42-211739No protein-
 
Retained intron
--TSL:2
ENST00000486136.5NUP42-208350No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 6, Coding exons: 2, Transcript length: 1,285 bps, Translation length: 44 residues

Transcript Support Level (TSL)

TSL:5

Version

ENST00000437140.5

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.