Description

PHD finger protein 21A [Source:HGNC Symbol;Acc:HGNC:24156]

Synonyms

BHC80, BM-006, KIAA1696

Location
Gene

This transcript is a product of gene ENSG00000135365

This gene has 21 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
PHF21A-002ENST000003231803675 bp634 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS31474E9PLV4 E9PNW9 E9PQM3
E9PR02 Q96BD5
NM_016621
NP_057705
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PHF21A-004ENST000004181532730 bp680 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS44578E9PLV4 E9PNW9 E9PQM3
E9PR02 Q96BD5
NM_001101802
NP_001095272
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PHF21A-010ENST00000525438577 bp26 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PNW9 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PHF21A-011ENST00000529782561 bp63 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PLV4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PHF21A-007ENST00000529734557 bp101 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PLV4 E9PNW9 E9PQM3
E9PR02
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PHF21A-021ENST00000524497555 bp134 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PLU5 E9PN72 E9PNW9
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PHF21A-016ENST00000525676550 bp93 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
PHF21A-019ENST00000532010546 bp9 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PHF21A-020ENST00000531959507 bp134 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PLU5 E9PN72 E9PNW9
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PHF21A-008ENST00000527782490 bp11 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PHF21A-009ENST00000533757466 bp51 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PNW9 E9PR02 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PHF21A-018ENST00000532028451 bp150 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0YCI1 -CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
PHF21A-017ENST000005305871293 bp116 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H0YEK2 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
PHF21A-013ENST000005328831051 bp82 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-E9PNW9 E9PR02 E9PS51
-
PHF21A-015ENST00000527753592 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
PHF21A-014ENST00000525679565 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
PHF21A-012ENST00000528893457 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
PHF21A-006ENST00000530312276 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
PHF21A-003ENST000005274018954 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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PHF21A-022ENST00000534766635 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
PHF21A-023ENST00000534724390 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Statistics

Exons: 18 Coding exons: 16 Transcript length: 2,730 bps Translation length: 680 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS44578

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96BD5

Ensembl version

ENST00000418153.3

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays