Description

adenomatous polyposis coli [Source:HGNC Symbol;Acc:583]

Gene

This transcript is a product of gene ENSG00000134982

This gene has 13 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
APC-201ENST0000045701611025ENSP000004131332843Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS4107YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
APC-001ENST0000025743010701ENSP000002574302843Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS4107YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
APC-004ENST0000050837610619ENSP000004270892843Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS4107YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
APC-005ENST000005122114061ENSP000004238281305Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
APC-002ENST000005073793602ENSP000004232241135Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
APC-011ENST00000504915817ENSP00000473355272Protein codingGenes and/or transcript that contains an open reading frame (ORF).5' and 3'--
APC-008ENST00000509732524ENSP00000426541118Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
APC-003ENST000005086247406ENSP00000424265287Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
APC-012ENST00000505350573No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
APC-007ENST000005023712630No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
APC-006ENST000005050841212No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
APC-014ENST00000514164645No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
APC-009ENST00000506342489No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
Statistics

Exons: 16 Coding exons: 15 Transcript length: 10,701 bps Translation length: 2,843 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS4107

Ensembl version

ENST00000257430.4

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000250738 (version 2)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays