Description

protein tyrosine phosphatase, non-receptor type 22 (lymphoid) [Source:HGNC Symbol;Acc:9652]

Gene

This transcript is a product of gene ENSG00000134242

This gene has 11 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCCDSGENCODE basic
PTPN22-001ENST000003597853654ENSP00000352833807Protein codingGenes and/or transcript that contains an open reading frame (ORF).CCDS863YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PTPN22-004ENST000005284143424ENSP00000435176752Protein codingGenes and/or transcript that contains an open reading frame (ORF).CCDS864YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PTPN22-006ENST000004203772726ENSP00000388229795Protein codingGenes and/or transcript that contains an open reading frame (ORF).-YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PTPN22-201ENST000005382532414ENSP00000439372563Protein codingGenes and/or transcript that contains an open reading frame (ORF).-YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PTPN22-007ENST000005257992118ENSP00000432674668Protein codingGenes and/or transcript that contains an open reading frame (ORF).-YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PTPN22-002ENST000004606201794ENSP00000433141179Protein codingGenes and/or transcript that contains an open reading frame (ORF).-YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PTPN22-008ENST000005322242421ENSP00000431249135Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. --
PTPN22-010ENST00000529045527ENSP0000043493292Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. --
PTPN22-009ENST00000534519565No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.-YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PTPN22-003ENST000004841472258No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
PTPN22-005ENST00000469077562No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
Statistics

Exons: 16 Coding exons: 0 Transcript length: 2,258 bps

Ensembl version

ENST00000484147.1

Type

Known retained intron

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000033017 (version 2)

Transcript-based displays