Description

cyclin A1 [Source:HGNC Symbol;Acc:HGNC:1577]

Synonyms

CT146

Location
About this transcript

This transcript has 9 exons, is annotated with 9 domains and features, is associated with 205 variations and maps to 27 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
CCNA1-001ENST000002554651879465aaENSP00000255465
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS9357P78396 NM_003914
NP_003905
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
CCNA1-002ENST000004402641758421aaENSP00000400666
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS45031P78396 NM_001111046
NM_001111047
NP_001104516
NP_001104517
TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

CCNA1-004ENST000006304221751421aaENSP00000486482
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS45031--GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

CCNA1-003ENST000006257671699464aaENSP00000486017
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--NM_001111045
NP_001104515
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Statistics

Exons: 9 Coding exons: 9 Transcript length: 1,879 bps Translation length: 465 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS9357

Uniprot

This transcript corresponds to the following Uniprot identifiers: P78396

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000255465.5

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays