Description

serine incorporator 3 [Source:HGNC Symbol;Acc:HGNC:11699]

Synonyms

AIGP1, DIFF33, SBBI99, TDE, TDE1, TMS-1

Location
Gene

This transcript is a product of gene ENSG00000132824

This gene has 4 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
SERINC3-001ENST000003423744445473 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS13333B4DUE9 Q13530 Q5H936
NM_006811
NP_006802
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website
SERINC3-201ENST000002551751726473 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS13333B4DUE9 Q13530 Q5H936
NM_198941
NP_945179
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website
SERINC3-002ENST00000411544812212 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5H936 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

SERINC3-003ENST00000468234393No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 11 Coding exons: 10 Transcript length: 1,726 bps Translation length: 473 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS13333

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13530

Transcript Support Level

5

Ensembl version

ENST00000255175.3

Type

Known protein coding

Prediction Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays