Description

serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 [Source:HGNC Symbol;Acc:HGNC:8824]

Synonyms

EPC-1, PEDF, PIG35

Location
Gene

This transcript is a product of gene ENSG00000132386

This gene has 12 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
SERPINF1-001ENST000002547221548 bp418 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11012I3L107 I3L2R7 I3L3Z3
I3L425 I3L4F9 P36955
NM_002615
NP_002606
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SERPINF1-009ENST00000576406795 bp91 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-I3L4F9 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SERPINF1-004ENST00000577053731 bp111 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-I3L3Z3 I3L425 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SERPINF1-012ENST00000573763729 bp138 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-I3L4N7 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SERPINF1-013ENST00000572048573 bp99 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-I3L107 I3L4F9 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SERPINF1-010ENST00000571360478 bp128 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-I3L4Z0 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SERPINF1-003ENST00000570731459 bp132 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-I3L2R7 I3L3Z3 I3L425
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SERPINF1-011ENST00000571149431 bp87 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-I3L425 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SERPINF1-006ENST00000573770789 bp114 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-I3L1U4 I3L425 -
SERPINF1-005ENST00000571870739 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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SERPINF1-008ENST00000570820820 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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SERPINF1-007ENST00000572517672 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Statistics

Exons: 8 Coding exons: 7 Transcript length: 1,548 bps Translation length: 418 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS11012

Uniprot

This transcript corresponds to the following Uniprot identifiers: P36955

Ensembl version

ENST00000254722.5

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays