Description

adhesion G protein-coupled receptor E3 [Source:HGNC Symbol;Acc:HGNC:23647]

Synonyms

EMR3

Location
About this transcript

This transcript has 16 exons, is annotated with 38 domains and features, is associated with 273 variations and maps to 32 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
ADGRE3-201ENST000003443732267600aaENSP00000340758
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS74297Q9BY15 NM_001289158
NP_001276087
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ADGRE3-001ENST000002536732254652aaENSP00000253673
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS12315Q9BY15 NM_032571
NP_115960
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

ADGRE3-002ENST000004431571971526aaENSP00000396208
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS74296E7EW83 NM_001289159
NP_001276088
TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ADGRE3-003ENST000005999002099437aaENSP00000471853
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-M0R1G2 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ADGRE3-004ENST0000059547248657aaENSP00000469965
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-M0QYN7 -TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Statistics

Exons: 16 Coding exons: 16 Transcript length: 2,254 bps Translation length: 652 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS12315

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BY15

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000253673.5

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays