Description

egf-like module containing, mucin-like, hormone receptor-like 3 [Source:HGNC Symbol;Acc:HGNC:23647]

Location
About this transcript

This transcript has 13 exons, is annotated with 29 domains and features, is associated with 196 variations and maps to 9 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
EMR3-201ENST000003443732267600aaENSP00000340758
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS74297Q9BY15 NM_001289158
NP_001276087
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
EMR3-001ENST000002536732254652aaENSP00000253673
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS12315Q9BY15 NM_032571
NP_115960
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
EMR3-002ENST000004431571971526aaENSP00000396208
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS74296E7EW83 NM_001289159
NP_001276088
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
EMR3-003ENST000005999002099437aaENSP00000471853
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-M0R1G2 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
EMR3-004ENST0000059547248657aaENSP00000469965
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-M0QYN7 -TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Statistics

Exons: 13 Coding exons: 13 Transcript length: 1,971 bps Translation length: 526 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS74296

Transcript Support Level (TSL)

TSL:2

Ensembl version

ENST00000443157.5

Type

Novel protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays