Description

DNA (cytosine-5-)-methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:2976]

Synonyms

CXXC9, DNMT, MCMT

Location
Gene

This transcript is a product of gene ENSG00000130816

This gene has 29 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
DNMT1-001ENST000003407485408 bp1616 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS12228B3KVA0 K7EKC3 K7ENQ6
K7ERQ1 P26358
NM_001379
NP_001370
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
DNMT1-002ENST000003595265206 bp1632 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS45958B3KVA0 I6L9H2 K7EKC3
K7ELB1 P26358
NM_001130823
NP_001124295
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
DNMT1-201ENST000005403574916 bp1280 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B3KVA0 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
DNMT1-009ENST00000588118973 bp255 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-K7EJL0 K7EKC3 K7ERQ1
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
DNMT1-012ENST00000588952841 bp119 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-K7EKC3 K7ENQ6 K7ERQ1
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
DNMT1-011ENST00000592342636 bp94 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-K7EKC3 K7ELB1 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
DNMT1-013ENST00000592054591 bp71 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-K7EKC3 K7ERQ1 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
DNMT1-010ENST00000586800583 bp26 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-K7EKC3 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
DNMT1-005ENST00000590619231 bp78 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
DNMT1-006ENST000005927055215 bp89 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-K7EMU8 -
DNMT1-008ENST000005889131775 bp389 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
DNMT1-015ENST00000586988711 bp40 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-K7EIZ6 -
DNMT1-019ENST00000586799672 bp55 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
DNMT1-029ENST00000589538559 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
DNMT1-021ENST00000593049534 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
DNMT1-028ENST00000591798521 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
DNMT1-014ENST00000586086489 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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DNMT1-004ENST000005865883094 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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DNMT1-018ENST00000585843911 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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DNMT1-026ENST00000587197809 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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DNMT1-020ENST00000586667714 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
DNMT1-024ENST00000589351672 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
DNMT1-016ENST00000589349603 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
DNMT1-027ENST00000589294575 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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DNMT1-025ENST00000589091563 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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DNMT1-022ENST00000591239550 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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DNMT1-017ENST00000585920529 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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DNMT1-023ENST00000587604513 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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DNMT1-007ENST00000591764341 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Statistics

Exons: 3 Coding exons: 0 Transcript length: 809 bps

Ensembl version

ENST00000587197.1

Type

Known retained intron

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays