Description

DNA (cytosine-5-)-methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:2976]

Synonyms

CXXC9, DNMT, MCMT

Location
Gene

This transcript is a product of gene ENSG00000130816

This gene has 29 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
DNMT1-001ENST000003407485408 bp1616 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS12228B3KVA0 K7EKC3 K7ENQ6
K7ERQ1 P26358
NM_001379
NP_001370
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
DNMT1-002ENST000003595265206 bp1632 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS45958B3KVA0 I6L9H2 K7EKC3
K7ELB1 P26358
NM_001130823
NP_001124295
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
DNMT1-201ENST000005403574916 bp1280 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B3KVA0 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
DNMT1-009ENST00000588118973 bp255 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-K7EJL0 K7EKC3 K7ERQ1
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
DNMT1-012ENST00000588952841 bp119 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-K7EKC3 K7ENQ6 K7ERQ1
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
DNMT1-011ENST00000592342636 bp94 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-K7EKC3 K7ELB1 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
DNMT1-013ENST00000592054591 bp71 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-K7EKC3 K7ERQ1 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
DNMT1-010ENST00000586800583 bp26 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-K7EKC3 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
DNMT1-005ENST00000590619231 bp78 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
DNMT1-006ENST000005927055215 bp89 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-K7EMU8 -
DNMT1-008ENST000005889131775 bp389 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
DNMT1-015ENST00000586988711 bp40 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-K7EIZ6 -
DNMT1-019ENST00000586799672 bp55 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
DNMT1-029ENST00000589538559 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
DNMT1-021ENST00000593049534 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
DNMT1-028ENST00000591798521 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
DNMT1-014ENST00000586086489 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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DNMT1-004ENST000005865883094 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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DNMT1-018ENST00000585843911 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
DNMT1-026ENST00000587197809 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
DNMT1-020ENST00000586667714 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
DNMT1-024ENST00000589351672 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
DNMT1-016ENST00000589349603 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
DNMT1-027ENST00000589294575 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
DNMT1-025ENST00000589091563 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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DNMT1-022ENST00000591239550 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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DNMT1-017ENST00000585920529 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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DNMT1-023ENST00000587604513 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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DNMT1-007ENST00000591764341 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Statistics

Exons: 40 Coding exons: 40 Transcript length: 5,408 bps Translation length: 1,616 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS12228

Uniprot

This transcript corresponds to the following Uniprot identifiers: P26358

Ensembl version

ENST00000340748.5

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays