Description

protein-O-mannosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:9202]

Synonyms

LGMD2K

Gene

This transcript is a product of gene ENSG00000130714

This gene has 16 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
POMT1-202ENST000004230073320 bp725 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS43894F5H3Z3 Q5JSZ6 Q5JT05
Q9Y6A1
NM_001136113
NP_001129585
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
POMT1-001ENST000003722283123 bp747 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS6943Q5JSZ6 Q5JT03 Q5JT07
Q9Y6A1
NM_007171
NP_009102
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
POMT1-003ENST000004026863038 bp725 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS43894F5H3Z3 Q5JSZ6 Q5JT05
Q9Y6A1
NM_001077365
NP_001070833
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
POMT1-002ENST000003410122912 bp671 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS43895F5H3Z3 Q5JT05 Q9Y6A1
NM_001077366
NP_001070834
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
POMT1-201ENST000004048752821 bp608 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS48045F5H3Z3 Q5JT05 Q9Y6A1
NM_001136114
NP_001129586
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
POMT1-012ENST000003722201741 bp346 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5JT02 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
POMT1-005ENST000004413341168 bp297 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5JT03 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
POMT1-007ENST00000415075847 bp156 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5JT04 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
POMT1-009ENST00000418774812 bp142 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B4DWD8 Q5JSZ6 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
POMT1-006ENST00000448212791 bp218 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5JT07 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
POMT1-008ENST00000430619691 bp168 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5JT05 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
POMT1-004ENST000004852783420 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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POMT1-011ENST000004623751001 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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POMT1-014ENST00000494883855 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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POMT1-010ENST00000483472568 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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POMT1-013ENST00000467848461 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Statistics

Exons: 19 Coding exons: 18 Transcript length: 2,912 bps Translation length: 671 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS43895

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y6A1

Ensembl version

ENST00000341012.8

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays