Description

filamin C, gamma [Source:HGNC Symbol;Acc:HGNC:3756]

Synonyms

ABP-280, ABPL, FLN2

About this transcript

This transcript has 47 exons, is annotated with 109 domains and features, is associated with 1124 variations and maps to 71 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
FLNC-001ENST0000032588891882725aaENSP00000327145
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS43644Q14315 NM_001458
NP_001449
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P3

PRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

FLNC-002ENST0000034617790422692aaENSP00000344002
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS47705Q14315 NM_001127487
NP_001120959
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT1

ALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

FLNC-003ENST00000388853570No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 47 Coding exons: 47 Transcript length: 9,042 bps Translation length: 2,692 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS47705

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14315

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000346177.6

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays