Description

phosphoribosyl pyrophosphate amidotransferase [Source:HGNC Symbol;Acc:HGNC:9238]

Synonyms

GPAT, PRAT

Location
About this transcript

This transcript has 11 exons, is annotated with 13 domains and features, is associated with 115 variations and maps to 42 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
PPAT-001ENST000002642203682517aaENSP00000264220
 
Protein coding
CCDS3505A8K4H7 Q06203 NM_002703
NP_002694
TSL:1GENCODE basicAPPRIS P1
PPAT-005ENST00000510643808192aaENSP00000423781
 
Nonsense mediated decay
-D6RCC8 -TSL:5
PPAT-004ENST0000050772456372aaENSP00000425119
 
Nonsense mediated decay
-D6RE15 -TSL:3
PPAT-003ENST00000507648928No protein-
 
Processed transcript
---TSL:5
PPAT-002ENST000004253394043No protein-
 
Retained intron
---TSL:1
Statistics

Exons: 11 Coding exons: 11 Transcript length: 3,682 bps Translation length: 517 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS3505

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q06203

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000264220.6

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Stop codons

This transcript has a variant, rs2660744, that causes a stop codon to be gained in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HapMap-YRI, CSHL-HAPMAP:HapMap-HCB, CSHL-HAPMAP:HapMap-JPT, CSHL-HAPMAP:HapMap-CEU.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays