Description

SIX homeobox 1 [Source:HGNC Symbol;Acc:10887]

Location
Gene

This transcript is a product of gene ENSG00000126778

This gene has 5 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
SIX1-001ENST000002471823996ENSP00000247182284Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS9748YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
SIX1-005ENST00000554986512ENSP00000452700111Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
SIX1-004ENST000005559552504ENSP00000450952110Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. 5'--
SIX1-002ENST00000553535862ENSP000004507394Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. 5'--
SIX1-003ENST00000555627461No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
Statistics

Exons: 2 Coding exons: 2 Transcript length: 512 bps Translation length: 111 residues

Ensembl version

ENST00000554986.1

Type

Putative protein coding

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTHUMT00000412199 (version 3)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays