Description

endothelin 3 [Source:HGNC Symbol;Acc:HGNC:3178]

Synonyms

ET3

Location
About this transcript

This transcript has 4 exons, is annotated with 7 domains and features, is associated with 207 variations and maps to 19 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
EDN3-002ENST000003115852655219aaENSP00000311854
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS13479P14138 NM_207032
NP_996915
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
EDN3-001ENST000003379382636238aaENSP00000337128
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS13477P14138 NM_001302455
NM_207034
NP_001289384
NP_996917
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI4APPRIS candidate principal isoform (longest CCDS)
Glossary entry for APPRIS
APPRIS website
EDN3-201ENST000003710282397238aaENSP00000360067
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS13477P14138 NM_000114
NP_000105
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI4APPRIS candidate principal isoform (longest CCDS)
Glossary entry for APPRIS
APPRIS website
EDN3-003ENST000003956542318224aaENSP00000379015
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS13478P14138 NM_207033
NP_996916
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
EDN3-004ENST000003710251153192aaENSP00000360064
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q4FAT2 NP_001289385
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
Statistics

Exons: 4 Coding exons: 4 Transcript length: 2,318 bps Translation length: 224 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS13478

Uniprot

This transcript corresponds to the following Uniprot identifiers: P14138

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000395654.3

Type

Known protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays