Description

VAMP (vesicle-associated membrane protein)-associated protein B and C [Source:HGNC Symbol;Acc:HGNC:12649]

Synonyms

ALS8, VAP-B, VAP-C

Location
Gene

This transcript is a product of gene ENSG00000124164

This gene has 6 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
VAPB-001ENST000004752437936 bp243 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS33498B3KVU7 O95292 Q53XM7
NM_004738
NP_004729
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
VAPB-002ENST000003958021834 bp99 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56198O95292 Q59EZ6 NM_001195677
NP_001182606
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
VAPB-006ENST00000520497937 bp71 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-E5RK64 -
VAPB-004ENST000002656193596 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
VAPB-003ENST000004633702393 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
VAPB-005ENST000004763953583 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 6 Coding exons: 6 Transcript length: 7,936 bps Translation length: 243 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS33498

Uniprot

This transcript corresponds to the following Uniprot identifiers: O95292

Ensembl version

ENST00000475243.2

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays