Description

gap junction protein, beta 6, 30kDa [Source:HGNC Symbol;Acc:HGNC:4288]

Synonyms

CX30, DFNA3, ED2, EDH, HED

Location
Gene

This transcript is a product of gene ENSG00000121742

This gene has 4 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
GJB6-004ENST000003561922131261 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS9291A0A024RDS4 O95452 NM_001110219
NP_001103689
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
GJB6-003ENST000004000661927261 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS9291A0A024RDS4 O95452 NM_001110220
NP_001103690
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
GJB6-001ENST000002411241808261 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS9291A0A024RDS4 O95452 NM_006783
NP_006774
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
GJB6-002ENST000004000651805261 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS9291A0A024RDS4 O95452 NM_001110221
NP_001103691
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Statistics

Exons: 5 Coding exons: 1 Transcript length: 2,131 bps Translation length: 261 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS9291

Uniprot

This transcript corresponds to the following Uniprot identifiers: O95452

Transcript Support Level

2

Ensembl version

ENST00000356192.6

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays