Human (GRCh38.p14)
Description

mutS homolog 6 [Source:HGNC Symbol;Acc:HGNC:7329]

Gene Synonyms

GTBP, MSH-6

Location
About this transcript

This transcript has 8 exons, is annotated with 26 domains and features, is associated with 27530 variant alleles and maps to 497 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000234420.11MSH6-20142651360aaENSP00000234420.5
 
Protein coding
CCDS1836P52701-1 NM_000179.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P4TSL:1
ENST00000652107.1MSH6-21176691261aaENSP00000498629.1
 
Protein coding
A0A494C0M1 -GENCODE basic
ENST00000700002.1MSH6-21742331362aaENSP00000514750.1
 
Protein coding
A0A8V8TQJ0 -GENCODE basicAPPRIS ALT1
ENST00000455383.6MSH6-20641101261aaENSP00000397484.2
 
Protein coding
C9J8Y8 -GENCODE basicTSL:5
ENST00000420813.6MSH6-20341061261aaENSP00000390382.2
 
Protein coding
C9JH55 -GENCODE basicTSL:4
ENST00000411819.2MSH6-20239741261aaENSP00000406248.2
 
Protein coding
C9J7Y7 -GENCODE basicTSL:4
ENST00000673637.1MSH6-21239591261aaENSP00000501310.1
 
Protein coding
A0A494C0M1 -GENCODE basic
ENST00000700004.2MSH6-21938501232aaENSP00000514752.2
 
Protein coding
A0A8V8TQW9 -GENCODE basic
ENST00000540021.6MSH6-20938291230aaENSP00000446475.1
 
Protein coding
CCDS62906P52701-3 -GENCODE basicTSL:2
ENST00000700000.1MSH6-2152646838aaENSP00000514749.1
 
Protein coding
A0A8V8TPJ4 -GENCODE basic
ENST00000445503.5MSH6-2044158160aaENSP00000405294.1
 
Nonsense mediated decay
F8WAX8 -TSL:1
ENST00000700003.1MSH6-2181593229aaENSP00000514751.1
 
Nonsense mediated decay
A0A8V8TPR2 --
ENST00000456246.1MSH6-207846104aaENSP00000410570.1
 
Nonsense mediated decay
F8W7G9 -TSL:3
ENST00000607272.2MSH6-2102219No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000700010.1MSH6-2251547No protein-
 
Protein coding CDS not defined
---
ENST00000493177.1MSH6-208813No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000454137.5MSH6-205725No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000673922.1MSH6-213573No protein-
 
Protein coding CDS not defined
---
ENST00000700006.1MSH6-2215230No protein-
 
Retained intron
---
ENST00000699999.1MSH6-2144822No protein-
 
Retained intron
---
ENST00000700011.1MSH6-2263433No protein-
 
Retained intron
---
ENST00000700005.1MSH6-2203067No protein-
 
Retained intron
---
ENST00000700001.1MSH6-2163059No protein-
 
Retained intron
---
ENST00000700009.1MSH6-2242812No protein-
 
Retained intron
---
ENST00000700007.1MSH6-2222750No protein-
 
Retained intron
---
ENST00000700008.1MSH6-2232401No protein-
 
Retained intron
---
Statistics

Exons: 8, Coding exons: 8, Transcript length: 3,829 bps, Translation length: 1,230 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P52701

CCDS

This transcript is a member of the Human CCDS set: CCDS62906

Transcript Support Level (TSL)

TSL:2

Version

ENST00000540021.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.